Transcript Dmel\Pka-C1-RA

General Information
Symbol	Dmel\Pka-C1-RA	Species	D. melanogaster
Annotation Symbol	CG4379-RA	FlyBase ID	FBtr0079850
Feature type	mRNA	Associated gene	Dmel\Pka-C1
Created / Updated	2000-02-23/2004-06-05

Evidence Rank	Weakly Supported	Length (nt)	2130
Evidence Score	3

Map ( GBrowse )
cDNA Clones Consistent with the Transcript ( 30 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent
End(s) extend beyond the annotated transcript, internally consistent
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	RH07051 RH06528 UUGC0042 LD45376 RE63830 RE58447 EC055443 SD24707 EP11737 RH74133 LD11707 LD04794 RH08813 EK184743 LD11881 RE12785 LD11934 LD03895 RH04921 RH05286 EK191907 EK261317 EK209142 HL05610 RE32441 LD19920 RE32480 RE48991 RH06440 RE44170
End(s) extend beyond the annotated transcript, internally consistent
Sequence
	AGTCGAAAAAAAAACTTTGAACGATTTGGTCGGGAAAACTCGGTTCGGCG GCTATGCGGGTATTTTTAATCTAAGCCATCAATCCACAGCTACAGTGCAT CAAATCGATCGGAAAGTCGAGGCAATATTTCTGAAAGTGTTTACAAATCG CTGGCATCGTAGTCGTAAATTTCAAAAAGCTTCTCAAATTAGAGTAAATC GCGATCATAAGCAACCTTAAAGTGTGAAACCAAATGTTAGTCTAAGCCTA AAGTGTATAACTAGTTTAAGACCTCACAAATTAAAGAAACCAATACGTGC TAAAACCATAACTTAAACGCGTCTTAACCAAGCGCCTTTAAAACGCAACC TAAACACCAATTTAAAAGGATATTCAGCGAATAAGAGAGTGAGAGAGCTC CAGTGAGAAGCTCTCTTTGGCCCATAAGGAGCAACTATTTCATCCGCACC GTTGACCCGTAACTCGGCAAAATAGCTAAGTCCATTTTGCAGTTCCTCAA AAAGAAAAAGTCCCATCATAGTTCCACATCCGGCGAGGGCAAGCTACAGG CGCAGTCCAGTTGCGAGGAGGAGGGCGGAGCGGCAGCGGGAGGAGCGGGA GCGGCAGCGGGACCTCCAGCGGACCAGGCTAGCAGCAGCAGCAGCGGCCC CTCGTCAGCAGCCGCCGCCCACAAGAGCACGCCCCCTGCCGCCACGACCA CGCCCGGTTCAGGGGCGGATTCAGGAGGAGCCAGCGGAGGAACAGGAGGA GGGGGAGGAGGACCTAGCACCTCCGGCGACGATCAGGCCCAAGTGTCGGC CAGCGCAACCTTCCGTTTGTCATCGCTAACGGGCACCATCTCCAAGATGG GCAACAACGCCACCACGTCGAATAAGAAGGTCGATGCCGCCGAGACGGTG AAGGAGTTCCTCGAGCAGGCCAAGGAGGAGTTCGAGGACAAGTGGCGACG CAATCCGACCAACACCGCCGCCCTCGATGACTTCGAACGGATCAAGACCC TGGGCACCGGCTCCTTTGGCCGTGTCATGATCGTCCAGCACAAGCCCACG AAAGACTATTATGCCATGAAGATCCTCGACAAGCAGAAGGTGGTCAAGCT GAAGCAGGTGGAGCACACGCTGAACGAGAAGCGAATCCTGCAGGCCATTC AGTTCCCCTTCCTCGTCTCGCTGCGCTACCACTTCAAGGACAACTCCAAC CTTTACATGGTGCTGGAGTATGTTCCCGGTGGCGAGATGTTCTCCCACCT GCGCAAGGTGGGCCGCTTCTCGGAGCCGCACTCGCGCTTCTACGCGGCGC AAATCGTGCTGGCCTTCGAGTACCTGCACTACTTGGACCTCATCTACCGT GATCTGAAGCCGGAGAATCTGCTGATTGACTCGCAGGGCTACCTCAAGGT GACGGACTTCGGTTTTGCCAAGCGGGTCAAGGGACGCACCTGGACACTGT GCGGCACGCCCGAATACCTGGCCCCGGAGATCATTCTGTCCAAGGGCTAT AACAAGGCCGTGGACTGGTGGGCGTTGGGCGTACTCGTCTACGAAATGGC CGCCGGCTATCCGCCGTTCTTTGCGGATCAGCCGATTCAGATCTACGAGA AGATCGTCTCCGGCAAGGTGCGCTTCCCATCGCACTTTGGCTCCGATCTG AAGGACCTACTGCGCAACCTGCTGCAGGTGGATCTGACCAAGCGCTACGG CAATCTGAAGGCGGGCGTCAATGATATTAAGAACCAGAAGTGGTTCGCCT CCACCGACTGGATTGCGATCTTCCAAAAGAAAATCGAGGCGCCGTTCATT CCGCGGTGTAAGGGTCCCGGCGACACGAGCAATTTCGATGACTACGAGGA GGAGGCGCTGCGGATCTCCAGCACCGAGAAGTGTGCCAAGGAGTTTGCTG AATTCTAGAGGAGCTCTTCGCCAGTCAGCCCAATCCCCTCGTTCTGCAGG CGCCTGCAACTGCAATTGTATCCGCTACTGCGATTGTATCTGCAACTGCT CCTGCTGTTGCCACCGCCGTGGCATCGCGGACCACGTCCTCATCGTCGTT GTCGTCGTCTTGTCTATATGTCTACTACTTACAACTACAACAACTGTAAC AGCCCCTCCCACAACACAAAAACTACAGCC
Other Products of this Gene
Other Transcripts
	Name FlyBase ID Length (nt) Pka-C1-RB FBtr0079851 2769 Pka-C1-RC FBtr0079852 2967
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) Pka-C1-PA FBpp0079447 353
Derived from OTHER transcripts	Name FlyBase ID Length (aa) Pka-C1-PB FBpp0079448 353 Pka-C1-PC FBpp0089382 353
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_057629
Synonyms
	Pka-C1-RA
References ( 2 )
FlyBase analysis	FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453] FlyBase, 1996-, FlyBase inference based on genome sequence analysis. FlyBase inference based on genome sequence analysis. [FBrf0104946]