A Database of Drosophila Genes & Genomes

FB2008_07, released August 8, 2008
 

Aberration Dmel\Df(1)r-D1

General Information
SymbolDmel\Df(1)r-D1SpeciesD. melanogaster
NameDeficiency (1) rudimentaryFlyBase IDFBab0000884
Feature typechromosomal_deletionCreated / Updated2006-08-22/2006-08-22
Formalized genetic data mei-41 << bk1 << l(1)15DFb << l(1)15DFa << bk2 << l(1)ESHS51
Sequence coordinates
Deleted segment14C5--15B1
Duplicated segment
Computed Breakpoints include 14C5-14C6;15B1
Breakpoints Inherited  
hide Nature of the Aberration
Cytological Order
Progenitor
Mutagen
ICR 170
 
Class of aberration (relative to progenitor)
chromosomal_deletion
(Homyk and Pye, 1989, Ganetzky, 1984, Banga et al., 1995, McKim et al., 1996, Fyrberg et al., 1994, Harbecke and Lengyel, 1995)
Breakpoints
14C2-14C4;15B2-15C1
(Ganetzky, 1984, Homyk and Pye, 1989)
14B;15B
(Fyrberg et al., 1994)
14C5-14C6;15A6-15B1
(Banga et al., 1995)
14B6;15A2
(Harbecke and Lengyel, 1995)
14D1-14D2;15D1-15D2
(McKim et al., 1996)
Causes alleles
Carries alleles
Transposon Insertions
Genetic mapping information
Comments
hide Comments on Cytology
Limits of break 1 from polytene analysis (FBrf0079877) Left limit of break 2 from polytene analysis (FBrf0076870) Right limit of break 2 from polytene analysis (FBrf0079877)
 
Simple deficiency. Breakpoints are 14B6;15A2 or 14C2-14C4;15B2
(Pauli et al., 1995)
Ref: FBrf0040979.
(McKim et al., 1996)
hide Molecularly Mapped Breakpoints
 
hide Sequence Crossreferences
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
hide Gene Deletion & Duplication Data
hide Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted
para
(Ganetzky, 1984, Eeken et al., 1985, Schalet, 1986, Homyk and Pye, 1989, Lilly et al., 1994, Banga et al., 1995)
if
(Schalet, 1986)
Arp14D
(Fyrberg et al., 1994)
l(1)14DEb
(Banga et al., 1995)
l(1)14Db
(Schalet, 1986)
l(1)15ACa
(Schalet, 1986)
l(1)ESHS50
(Eeken et al., 1985)
l(1)14DEa
(Banga et al., 1995)
un
(Schalet, 1986)
l(1)15DFb
(Schalet, 1986)
l(1)15DFa
(Schalet, 1986)
l(1)ESHS49
(Eeken et al., 1985)
Molecular Data
hide Genes NOT Deleted / Disrupted
Complementation Data
U2af50
(Schalet, 1986, Lindsley, 1993, Banga et al., 1995)
mei-41
(Eeken et al., 1985, Banga et al., 1995)
nonA
(Stanewsky et al., 1993, Banga et al., 1995)
bss
(Ganetzky and Wu, 1982)
l(1)9-38-1
(Schalet, 1986, Banga et al., 1995)
l(1)14Cd
(Lindsley, 1993)
M(1)15DEF
(Eeken et al., 1985)
l(1)ESHS47
(Eeken et al., 1985)
l(1)ESHS51
(Eeken et al., 1985)
l(1)14ABa
(Eeken et al., 1985)
M(1)14C
(Schalet, 1986, Banga et al., 1995)
l(1)14Cc
(Lindsley, 1993)
l(1)16ACa
(Schalet, 1986)
l(1)14BCa
(Schalet, 1986, Banga et al., 1995)
l(1)16ACb
(Schalet, 1986)
tc
(Schalet, 1986)
l(1)14Cb
(Lindsley, 1993, Banga et al., 1995)
l(1)14Ce
(Lindsley, 1993)
mh
(Loppin et al., 2001)
Gpi1
(Schalet, 1986, Lindsley, 1993, Banga et al., 1995)
Molecular Data
hide Genes Duplicated
Complementation Data
Molecular Data
hide Genes NOT Duplicated
Complementation Data
Molecular Data
hide Related Comments
hide Phenotypic Data
In combination with other aberrations
NOT in combination with other aberrations
Hemizygous embryos were examined with polarised light microscopy and antibody staining: no syncytial muscles develop, embryos are immobile, and visceral mesoderm development is also impaired.
(Drysdale et al., 1993)
Heterozygosity for this deletion has no effect on the mutant ovarian phenotype of ovoD2.
(Pauli et al., 1995)
Homozygous embryos are very abnormal compared to wild-type.
(Harbecke and Lengyel, 1995)
Intermediate second site non-complementing phenotype with zipEbr and zipmhc-c6.1: malformed phenotype penetrance 25-75%.
(Halsell and Kiehart, 1998)
Midgut development of mutant embryos is wild type.
(Bilder and Scott, 1995)
Semilethal opposite r, r29, or r38 para- r- Two Minutes surround r ; the one on the left, M(1)14C, is new, the one on the right is RpS5 (Lefevre)
 
hide Position Effect Variegation Data
  
hide Stocks ( 3 )
Kyoto
108140
Df(1)r-D1/C(1)DX, y1 f1; Dp(1;4)r+m
106698
Df(1)r-D1, v1 f1/C(1)DX, y1 w1 f1; Dp(1;4)r+*/+
Bloomington
5272
Df(1)r-D1, v1 f1/C(1)DX, y1 f1; Dp(1;4)r+m
hide Notes on Origin
Discoverer
hide Balancer / Genotype Variants of the Aberration
    hide Separable Components
      hide Other Comments
      "14C5--6;15A6--B1" was stated as revision.
      (Banga et al., 1995)
      hide Synonyms & Secondary IDs ( 8 )
      Reported As
      Symbol Synonym
      Df(1)(D)
       
      Df(1)r1D
      (Wieschaus et al., 1984)
      Df(1)rD1
      (Lammel and Saumweber, 2000, Schalet, 1986, Eeken et al., 1985, Ganetzky, 1984, Ganetzky and Wu, 1982, Lilly and Carlson, 1990)
      Df(1)rD1
      (McKim et al., 1996)
      Df(1)r-D1
       
      Df(1)r-Dl
      (Homyk and Pye, 1989)
      rD1
      (Livingstone et al., 1984)
      Name Synonym
      Deficiency (1) rudimentary
       
      Secondary FlyBase IDs
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